Principal Scientist, Protein Design
- Employer
- Moderna, Inc.
- Location
- Cambridge, Massachusetts
- Posted date
- Sep 28, 2026
View more categories
- Discipline
- Science/R&D, Biotechnology
- Required Education
- Doctorate/PHD/MD
- Position Type
- Full time
- Hotbed
- Genetown
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Job Details
The Role
Moderna is seeking an individual to provide technical leadership for in vitro selection and cell-surface screening of viral and bacterial antigens. This role will lead the design, execution, and continuous advancement of high-throughput mammalian cell–based screening platforms that interrogate broadly applicable design principles for glycoprotein antigens, enabling antigen optimization, improved expression and durability across multiple programs, and rapid maturation of computationally designed candidates.
The perfect candidate will provide technical leadership through direct involvement in the design and execution of complex in vitro selection campaigns, setting experimental strategy and partnering closely with computational protein design teams to ensure designs are evaluated and refined at scale. In addition to antigen-focused efforts, this individual will be cross-trained to support screening of de novo designed proteins, including minibinders and VHHs, as a shared discovery resource. This role is intended for a scientist ready to own and evolve a core discovery capability, led by scientific judgment and execution, and shape in vitro selection integrates with AI- and structure-guided design across Moderna’s pipeline.
The candidate in this position will work closely with and report to the Senior Director, Computational Design and In Vitro Selection, and will also work closely with the VP, Protein Design, as well as other members of Research, to advance novel candidates to the clinic, drive exploratory trials to inform the generation of improved vaccine antigens and explore new concepts for mRNA medicines.
Here’s What You’ll Do
Lead execution of in vitro selection and cell-surface screening campaigns, providing technical leadership through direct involvement in experimental design and execution.
Design and run high-throughput mammalian display campaigns for complex, multimeric glycoproteins.
Build and deploy scalable screening systems that replace resource-intensive plate-based assays.
Develop and operationalize advanced in vitro selection and directed-evolution capabilities, including novel selection pressures and expanded mammalian display modalities.
Serve as a key experimental partner to computational protein design teams, generating high-quality datasets and actionable design feedback.
Provide technical mentorship and scientific guidance to other scientists.
Represent in vitro selection capabilities in cross-functional discovery and platform discussions.
Mentor and technically guide junior scientists to elevate overall design quality.
Here’s What You’ll Need (Basic Qualifications)
PhD in Immunology, Molecular Biology, Biochemistry, Protein Engineering, or a related field.
5+ years of post-PhD industry or equivalent experience leading in vitro selection, mammalian cell-surface display, or directed-evolution efforts.
Demonstrated ability to drive complex screening campaigns end-to-end.
Deep expertise in mammalian display systems, high-throughput selection strategies, and experimental assay design.
Strong working knowledge of computational, structure-based, or AI-driven protein design workflows.
Scientific independence, judgment, and ownership consistent with a Principal Scientist role.
Here’s What You’ll Bring to the Table (Preferred Qualifications)
Expertise with glycoprotein antigen expression and engineering (e.g., strategies around folding, trafficking, cleavage, stability, and glycan impacts).
Strong capabilities in library design and construction (site-saturation, combinatorial, error-prone, DNA assembly), plus NGS-based readouts and quantitative enrichment analysis.
A desire to make an impact as part of a high-growth, transformational company that is Bold, Relentless, Curious, and Collaborative.
Pay & Benefits
At Moderna, we believe that when you feel your best, you can do your best work. That’s why our US benefits and global well-being resources are designed to support you—at work, at home, and everywhere in between.
Best-in-class healthcare coverage, plus voluntary benefit programs to support your unique needs
A holistic approach to well-being, with access to fitness, mindfulness, and mental health support
Family planning benefits, including fertility, adoption, and surrogacy support
Generous paid time off, including vacation, volunteer days, sabbatical, global recharge days, and a discretionary year-end shutdown
Savings and investment opportunities to help you plan for the future
Location-specific perks and extras
About Moderna
Since our founding in 2010, we have aspired to build the leading mRNA technology platform, the infrastructure to reimagine how medicines are created and delivered, and a world-class team. We believe in giving our people a platform to change medicine and an opportunity to change the world.
By living our mission, values, and mindsets every day, our people are the driving force behind our scientific progress and our culture. Together, we are creating a culture of belonging and building an organization that cares deeply for our patients, our employees, the environment, and our communities.
We are proud to have been recognized as a Science Magazine Top Biopharma Employer, a Fast Company Best Workplace for Innovators, and a Great Place to Work in the U.S.
If you want to make a difference and join a team that is changing the future of medicine, we invite you to visit modernatx.com/careers to learn more about our current opportunities.
Our Working Model
As we build our company, we have always believed an in-person culture is critical to our success. Moderna champions the significant benefits of in-office collaboration by embracing a 70/30 work model. This 70% in-office structure helps to foster a culture rich in innovation, teamwork, and direct mentorship. Join us in shaping a world where every interaction is an opportunity to learn, contribute, and make a meaningful impact.
Moderna is a smoke-free, alcohol-free, and drug-free work environment.
Equal Opportunities
Moderna is committed to equal employment opportunity and non-discrimination for all employees and qualified applicants without regard to a person's race, color, sex, gender identity or expression, age, religion, national origin, ancestry or citizenship, ethnicity, disability, military or protected veteran status, genetic information, sexual orientation, marital or familial status, or any other personal characteristic protected under applicable law.Moderna is a place where everyone can grow. If you meet the Basic Qualifications for the role and you would be excited to contribute to our mission every day, please apply!
Moderna is an E-Verify Employer in the United States. We consider qualified applicants regardless of criminal histories, consistent with legal requirements.
Accommodations
We’re focused on attracting, retaining, developing, and advancing our employees. By cultivating a workplace that values diverse experiences, backgrounds, and ideas, we create an environment where every employee can contribute their best.
Moderna is committed to offering reasonable accommodations to qualified job applicants with disabilities. Any applicant requiring an accommodation in connection with the hiring process and/or to perform the essential functions of the position for which the applicant has applied should contact the Accommodations team at leavesandaccommodations@modernatx.com.
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Company
Moderna is advancing messenger RNA (mRNA) science to create a new class of transformative medicines for patients. Moderna’s platform builds on continuous advances in basic and applied mRNA science, delivery technology and manufacturing, providing the Company the capability to pursue in parallel a robust pipeline of new development candidates. Moderna is developing therapeutics and vaccines for infectious diseases, immuno-oncology, rare diseases and cardiovascular diseases, independently and with strategic collaborators.
mRNA is now a turning point in the history of science, medicine, technology, even humankind itself. With this breakthrough discovery, many of the world’s biggest and most challenging medical problems are no longer a question of “how?” but merely a question of “when?”
Come with us as we pursue the uncharted reaches of possibility and make your mark on the future of medicine.
Moderna employees share their thoughts on our culture, values and mission. To hear additional employee stories and learn more about our inclusive and innovative benefits offerings, visit us on our website.
Stock Symbol:
MRNA
Stock Exchange:
USNASDAQ GS
- Phone
- 617-714-6500
- Location
- 200 Technology Square
Cambridge, MA
